BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC012435
Symbol
 LOC659541
Product
 Josephin-like protein
NCBI Equivalent
659541
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head8.1 ± 0.20.712 ± 0.71.2
Brain17 ± 0.31.418 ± 2.21.9
Anterior Midgut21 ± 1.41.824 ± 4.02.5
Posterior Midgut25 ± 2.52.123 ± 2.02.4
Hindgut22 ± 1.01.818 ± 0.81.9
Tubules (Free)8.2 ± 1.20.79.7 ± 0.61.0
Perirectal Tubules11 ± 1.90.9  
Rectum11 ± 1.70.9  
Rectal complex7.8 ± 0.60.78.1 ± 0.30.8
Fat Body27 ± 3.62.220 ± 4.22.1
Male Gonads41 ± 3.63.4  
Female Gonads7.2 ± 0.50.6  
Carcass15 ± 1.41.322 ± 4.02.2
Whole Body12 ± 1.79.7 ± 1.0
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC012435-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC01243516 ± 2.253 ± 2.895 ± 1487 ± 18
TC012435-RA16 ± 2.253 ± 2.895 ± 1487 ± 18
0–1 h1–24 h24–36 h36–72 h050100150200FPKM