BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC012508

Symbol
Ppp2r1a

Product
Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit-like Protein

NCBI Equivalent
641602

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	37 ± 2.1	1.2	48 ± 1.6	1.6
Brain	176 ± 4.8	5.4	144 ± 7.2	4.6
Anterior Midgut	39 ± 2.2	1.2	30 ± 2.1	1.0
Posterior Midgut	36 ± 1.2	1.1	28 ± 2.5	0.9
Hindgut	68 ± 23	2.1	78 ± 28	2.5
Tubules (Free)	47 ± 0.9	1.4	53 ± 2.4	1.7
Perirectal Tubules	41 ± 0.2	1.3
Rectum	50 ± 0.8	1.6
Rectal complex	38 ± 1.5	1.2	46 ± 2.9	1.5
Fat Body	66 ± 15	2.0	56 ± 15	1.8
Male Gonads	127 ± 25	3.9
Female Gonads	82 ± 9.0	2.5
Carcass	59 ± 5.3	1.8	60 ± 23	1.9

Whole Body	32 ± 2.3		31 ± 2.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC012508-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC012508	13 ± 1.6	19 ± 2.4	25 ± 3.4	19 ± 1.1

TC012508-RA	13 ± 1.6	19 ± 2.4	25 ± 3.4	19 ± 1.1