BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC012647

Symbol
Arf1

Product
ADP-ribosylation factor 1-like Protein

NCBI Equivalent
656788

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	93 ± 4.1	1.0	167 ± 32	1.3
Brain	292 ± 13	3.0	318 ± 6.6	2.5
Anterior Midgut	842 ± 53	8.6	467 ± 7.2	3.7
Posterior Midgut	889 ± 78	9.1	507 ± 79	4.0
Hindgut	249 ± 81	2.5	236 ± 138	1.9
Tubules (Free)	157 ± 12	1.6	168 ± 5.9	1.3
Perirectal Tubules	164 ± 16	1.7
Rectum	181 ± 5.8	1.9
Rectal complex	126 ± 2.4	1.3	139 ± 1.9	1.1
Fat Body	206 ± 36	2.1	358 ± 101	2.9
Male Gonads	397 ± 47	4.1
Female Gonads	214 ± 12	2.2
Carcass	251 ± 40	2.6	252 ± 43	2.0

Whole Body	98 ± 4.2		125 ± 16

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC012647-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC012647	132 ± 18	225 ± 52	251 ± 52	168 ± 36

TC012647-RA	132 ± 18	225 ± 52	251 ± 52	168 ± 36