BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC012652

Symbol
LOC657517

Product
Rho guanine nucleotide exchange factor 10-like Protein

iBeetle-Base
TC012652

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	18 ± 4.9	1.8	30 ± 4.2	1.5
Brain	5.8 ± 0.5	0.6	6.8 ± 0.7	0.3
Anterior Midgut	17 ± 1.2	1.8	7.9 ± 2.3	0.4
Posterior Midgut	19 ± 1.6	2.0	9.0 ± 0.9	0.5
Hindgut	18 ± 8.1	1.9	23 ± 3.0	1.2
Tubule	7.6 ± 0.4	0.8	11 ± 0.5	0.6
Perirectal Tubules	31 ± 5.7	3.2
Rectal complex	45 ± 3.8	4.6	26 ± 3.1	1.4
Rectum	46 ± 4.8	4.7
Fat Body	18 ± 2.8	1.8	7.2 ± 3.0	0.4
Male Gonads	3.6 ± 0.6	0.4
Female Gonads	15 ± 1.3	1.5
Carcass	33 ± 3.8	3.4	18 ± 4.9	0.9

Whole Body	9.8 ± 2.3		19 ± 6.4

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC012652-RA
TC012652-RB
TC012652-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC012652	8.8 ± 0.8	4.7 ± 0.9	5.3 ± 0.5	3.7 ± 0.8

TC012652-RA	2.1 ± 0.5	1.3 ± 0.3	1.0 ± 0.1	0.7 ± 0.2
TC012652-RB	1.4 ± 0.2	1.0 ± 0.0	0.7 ± 0.0	0.4 ± 0.1
TC012652-RC	5.3 ± 0.5	2.4 ± 0.9	3.6 ± 0.5	2.7 ± 0.9