BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC012727

Symbol
LOC663502

NCBI Equivalent
663502

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	6.6 ± 0.6	1.1	9.4 ± 0.4	1.7
Brain	9.6 ± 0.2	1.6	8.4 ± 0.8	1.5
Anterior Midgut	5.8 ± 0.5	1.0	5.1 ± 0.7	0.9
Posterior Midgut	5.9 ± 0.4	1.0	5.7 ± 0.6	1.0
Hindgut	4.0 ± 0.5	0.7	4.1 ± 0.0	0.7
Tubules (Free)	6.8 ± 0.5	1.2	7.5 ± 0.4	1.3
Perirectal Tubules	7.2 ± 0.5	1.2
Rectum	8.4 ± 0.2	1.4
Rectal complex	6.8 ± 0.6	1.2	6.3 ± 0.7	1.1
Fat Body	4.5 ± 0.2	0.8	3.1 ± 1.4	0.5
Male Gonads	4.7 ± 1.5	0.8
Female Gonads	3.3 ± 0.2	0.6
Carcass	4.7 ± 1.0	0.8	4.2 ± 1.7	0.7

Whole Body	5.8 ± 0.4		5.7 ± 0.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC012727-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC012727	5.5 ± 0.3	5.7 ± 0.6	6.8 ± 0.8	4.9 ± 0.6

TC012727-RA	5.5 ± 0.3	5.7 ± 0.6	6.8 ± 0.8	4.9 ± 0.6