BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC012910
Symbol
 csw
Product
 Tyrosine-protein phosphatase corkscrew-like Protein
NCBI Equivalent
660085
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head30 ± 0.82.037 ± 181.6
Brain34 ± 3.82.322 ± 3.40.9
Anterior Midgut9.6 ± 0.50.69.4 ± 0.80.4
Posterior Midgut9.2 ± 1.20.611 ± 1.30.5
Hindgut49 ± 203.340 ± 7.21.7
Tubules (Free)25 ± 1.71.623 ± 2.51.0
Perirectal Tubules96 ± 116.4  
Rectum114 ± 137.6  
Rectal complex74 ± 4.04.951 ± 5.72.2
Fat Body15 ± 1.51.013 ± 1.20.5
Male Gonads11 ± 2.30.7  
Female Gonads15 ± 2.41.0  
Carcass45 ± 133.043 ± 131.8
Whole Body15 ± 1.024 ± 3.8
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC012910-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0129106.0 ± 0.64.1 ± 0.33.3 ± 0.33.7 ± 1.2
TC012910-RA6.0 ± 0.64.1 ± 0.33.3 ± 0.33.7 ± 1.2
0–1 h1–24 h24–36 h36–72 h0246810FPKM