BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC012925

Symbol
Adi1

Product
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase-like Protein

NCBI Equivalent
658827

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	35 ± 1.6	1.8	19 ± 1.2	0.6
Brain	15 ± 2.7	0.8	17 ± 2.6	0.5
Anterior Midgut	20 ± 1.2	1.0	21 ± 3.8	0.7
Posterior Midgut	22 ± 4.5	1.1	18 ± 2.4	0.5
Hindgut	86 ± 32	4.4	51 ± 25	1.6
Tubules (Free)	43 ± 2.1	2.2	41 ± 4.2	1.3
Perirectal Tubules	52 ± 11	2.6
Rectum	35 ± 1.2	1.8
Rectal complex	35 ± 4.0	1.8	30 ± 3.6	0.9
Fat Body	35 ± 19	1.8	354 ± 140	11
Male Gonads	14 ± 4.8	0.7
Female Gonads	33 ± 8.7	1.7
Carcass	43 ± 7.7	2.2	44 ± 18	1.4

Whole Body	20 ± 2.8		32 ± 5.2

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC012925-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC012925	71 ± 5.8	55 ± 2.2	51 ± 3.2	57 ± 20

TC012925-RA	71 ± 5.8	55 ± 2.2	51 ± 3.2	57 ± 20