BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC013627

Symbol
LOC657022

NCBI Equivalent
657022

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	15 ± 1.3	3.8	16 ± 2.5	1.6
Brain	0.1 ± 0.0	0.0	0.2 ± 0.1	0.0
Anterior Midgut	0.5 ± 0.2	0.1	0.7 ± 0.2	0.1
Posterior Midgut	0.7 ± 0.2	0.2	0.7 ± 0.2	0.1
Hindgut	3.2 ± 0.9	0.8	2.4 ± 0.6	0.2
Tubules (Free)	2.1 ± 0.1	0.5	0.9 ± 0.2	0.1
Perirectal Tubules	1.6 ± 2.2	0.4
Rectum	6.6 ± 1.4	1.6
Rectal complex	8.9 ± 0.7	2.2	3.0 ± 0.5	0.3
Fat Body	0.8 ± 0.3	0.2	0.1 ± 0.1	0.0
Male Gonads	0.5 ± 0.1	0.1
Female Gonads	0.2 ± 0.1	0.0
Carcass	14 ± 4.2	3.5	21 ± 14	2.1

Whole Body	4.1 ± 0.3		10 ± 1.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC013627-RA
TC013627-RB
TC013627-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC013627	0.9 ± 0.1	0.8 ± 0.0	0.8 ± 0.1	2.5 ± 0.2

TC013627-RA	0.2 ± 0.1	0.4 ± 0.1	0.3 ± 0.0	1.0 ± 0.1
TC013627-RB	0.5 ± 0.1	0.3 ± 0.1	0.2 ± 0.0	0.7 ± 0.0
TC013627-RC	0.2 ± 0.0	0.2 ± 0.1	0.2 ± 0.1	0.8 ± 0.2