BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC013677

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	5.7 ± 1.6	0.6	3.7 ± 0.7	0.7
Brain	5.9 ± 0.5	0.7	5.8 ± 0.9	1.0
Anterior Midgut	1.7 ± 0.1	0.2	3.3 ± 0.5	0.6
Posterior Midgut	1.8 ± 0.6	0.2	3.7 ± 0.8	0.7
Hindgut	15 ± 2.9	1.7	10 ± 0.9	1.9
Tubules (Free)	8.4 ± 1.2	0.9	6.6 ± 0.7	1.2
Perirectal Tubules	88 ± 37	9.8
Rectum	36 ± 1.7	4.0
Rectal complex	55 ± 5.1	6.1	32 ± 4.0	5.7
Fat Body	12 ± 5.2	1.3	3.8 ± 2.7	0.7
Male Gonads	25 ± 1.0	2.8
Female Gonads	1.7 ± 0.5	0.2
Carcass	7.6 ± 1.9	0.8	6.5 ± 0.7	1.1

Whole Body	8.9 ± 2.5		5.7 ± 3.0

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC013677-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC013677	9.8 ± 1.2	5.7 ± 0.3	6.4 ± 1.1	6.7 ± 2.2

TC013677-RA	9.8 ± 1.2	5.7 ± 0.3	6.4 ± 1.1	6.7 ± 2.2