BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC013780

Symbol
LOC660413

Product
Probable alpha-aspartyl dipeptidase-like Protein

NCBI Equivalent
660413

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	11 ± 0.8	0.2	17 ± 1.3	0.7
Brain	8.3 ± 0.3	0.2	10 ± 1.2	0.4
Anterior Midgut	368 ± 51	8.2	188 ± 17	7.9
Posterior Midgut	251 ± 54	5.6	77 ± 7.3	3.2
Hindgut	13 ± 3.8	0.3	16 ± 2.7	0.7
Tubules (Free)	16 ± 0.9	0.4	17 ± 0.7	0.7
Perirectal Tubules	16 ± 2.1	0.3
Rectum	14 ± 0.6	0.3
Rectal complex	12 ± 1.2	0.3	12 ± 1.9	0.5
Fat Body	83 ± 24	1.8	14 ± 1.5	0.6
Male Gonads	141 ± 9.2	3.1
Female Gonads	7.6 ± 1.2	0.2
Carcass	16 ± 0.7	0.3	17 ± 3.4	0.7

Whole Body	45 ± 7.6		24 ± 7.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC013780-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC013780	28 ± 0.5	18 ± 1.9	41 ± 5.8	30 ± 3.2

TC013780-RA	28 ± 0.5	18 ± 1.9	41 ± 5.8	30 ± 3.2