BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC013872
NCBI Equivalent
 not available
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head3.2 ± 0.21.13.2 ± 0.71.0
Brain9.2 ± 0.73.35.0 ± 0.31.6
Anterior Midgut8.5 ± 2.53.06.8 ± 2.92.2
Posterior Midgut7.5 ± 1.72.76.3 ± 0.52.0
Hindgut7.2 ± 1.12.65.0 ± 1.71.6
Tubules (Free)4.8 ± 0.31.75.2 ± 0.21.6
Perirectal Tubules5.1 ± 0.21.8  
Rectum4.1 ± 0.01.5  
Rectal complex4.1 ± 0.51.53.9 ± 0.31.2
Fat Body3.9 ± 0.51.410 ± 3.53.2
Male Gonads5.8 ± 0.82.0  
Female Gonads14 ± 3.05.0  
Carcass5.2 ± 0.61.94.4 ± 0.21.4
Whole Body2.8 ± 0.33.2 ± 0.4
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC013872-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC01387212 ± 0.94.6 ± 0.13.5 ± 0.53.0 ± 0.6
TC013872-RA12 ± 0.94.6 ± 0.13.5 ± 0.53.0 ± 0.6
0–1 h1–24 h24–36 h36–72 h05101520FPKM