BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC013913

Symbol
LOC659314

Product
DnaJ homolog subfamily A member 2-like Protein

NCBI Equivalent
659314

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	40 ± 2.6	1.0	64 ± 3.3	1.6
Brain	153 ± 1.8	3.7	87 ± 9.7	2.2
Anterior Midgut	79 ± 5.6	1.9	67 ± 3.0	1.7
Posterior Midgut	77 ± 7.1	1.9	64 ± 1.7	1.6
Hindgut	39 ± 9.1	0.9	47 ± 3.9	1.2
Tubules (Free)	48 ± 0.8	1.2	41 ± 2.6	1.0
Perirectal Tubules	76 ± 10	1.8
Rectum	71 ± 1.9	1.7
Rectal complex	53 ± 0.8	1.3	46 ± 6.2	1.2
Fat Body	50 ± 12	1.2	38 ± 5.1	1.0
Male Gonads	92 ± 13	2.2
Female Gonads	86 ± 12	2.1
Carcass	90 ± 22	2.2	62 ± 7.5	1.6

Whole Body	41 ± 2.8		40 ± 4.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC013913-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC013913	63 ± 4.3	42 ± 2.5	39 ± 2.9	27 ± 0.5

TC013913-RA	63 ± 4.3	42 ± 2.5	39 ± 2.9	27 ± 0.5