BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC013918

Symbol
Idgf2

Product
Chitinase-like protein Idgf4

NCBI Equivalent
655122

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	275 ± 9.2	4.1	95 ± 51	0.6
Brain	4464 ± 311	66	3644 ± 544	24
Anterior Midgut	29 ± 18	0.4	41 ± 12	0.3
Posterior Midgut	13 ± 5.1	0.2	28 ± 4.4	0.2
Hindgut	3152 ± 1709	47	3944 ± 3152	26
Tubules (Free)	12 ± 1.7	0.2	14 ± 0.8	0.1
Perirectal Tubules	326 ± 355	4.8
Rectum	1745 ± 139	26
Rectal complex	1461 ± 20	22	1112 ± 302	7.4
Fat Body	377 ± 141	5.6	3131 ± 2291	21
Male Gonads	48 ± 17	0.7
Female Gonads	28 ± 19	0.4
Carcass	1685 ± 622	25	800 ± 329	5.3

Whole Body	68 ± 7.0		150 ± 12

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC013918-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC013918	1.0 ± 0.2	1.0 ± 0.1	0.2 ± 0.1	0.9 ± 0.1

TC013918-RA	1.0 ± 0.2	1.0 ± 0.1	0.2 ± 0.1	0.9 ± 0.1