BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC013996

Symbol
LOC657567

NCBI Equivalent
657567

Fly Homologues
none identified

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	20 ± 0.5	1.5	3.4 ± 1.3	1.7
Brain	271 ± 3.5	21	84 ± 6.7	42
Anterior Midgut	0.8 ± 0.2	0.1	1.8 ± 0.5	n.a.
Posterior Midgut	0.9 ± 0.2	0.1	2.0 ± 0.3	1.0
Hindgut	4.6 ± 6.7	0.3	0.6 ± 0.3	n.a.
Tubules (Free)	0.0 ± 0.0	0.0	0.1 ± 0.0	n.a.
Perirectal Tubules	8.7 ± 4.2	0.7
Rectum	2.9 ± 1.1	0.2
Rectal complex	2.9 ± 0.2	0.2	1.0 ± 0.6	n.a.
Fat Body	27 ± 17	2.1	2.1 ± 2.9	1.0
Male Gonads	79 ± 17	6.0
Female Gonads	0.2 ± 0.2	0.0
Carcass	4.0 ± 1.5	0.3	1.9 ± 0.2	n.a.

Whole Body	13 ± 3.5		1.2 ± 0.8

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC013996-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC013996	0.5 ± 0.0	0.3 ± 0.1	0.2 ± 0.0	5.9 ± 0.7

TC013996-RA	0.5 ± 0.0	0.3 ± 0.1	0.2 ± 0.0	5.9 ± 0.7