BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC013996
Symbol
 LOC657567
NCBI Equivalent
657567
Fly Homologues
 none identified
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head20 ± 0.51.53.4 ± 1.31.7
Brain271 ± 3.52184 ± 6.742
Anterior Midgut0.8 ± 0.20.11.8 ± 0.5n.a.
Posterior Midgut0.9 ± 0.20.12.0 ± 0.31.0
Hindgut4.6 ± 6.70.30.6 ± 0.3n.a.
Tubules (Free)0.0 ± 0.00.00.1 ± 0.0n.a.
Perirectal Tubules8.7 ± 4.20.7  
Rectum2.9 ± 1.10.2  
Rectal complex2.9 ± 0.20.21.0 ± 0.6n.a.
Fat Body27 ± 172.12.1 ± 2.91.0
Male Gonads79 ± 176.0  
Female Gonads0.2 ± 0.20.0  
Carcass4.0 ± 1.50.31.9 ± 0.2n.a.
Whole Body13 ± 3.51.2 ± 0.8
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC013996-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0139960.5 ± 0.00.3 ± 0.10.2 ± 0.05.9 ± 0.7
TC013996-RA0.5 ± 0.00.3 ± 0.10.2 ± 0.05.9 ± 0.7
0–1 h1–24 h24–36 h36–72 h0246810FPKM