BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC014005

Symbol
LOC659171

Product
Reticulocalbin-2-like Protein

NCBI Equivalent
659171

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	25 ± 2.0	1.5	34 ± 6.5	1.5
Brain	93 ± 4.2	5.3	71 ± 5.4	3.1
Anterior Midgut	8.3 ± 1.4	0.5	10 ± 2.0	0.5
Posterior Midgut	9.9 ± 2.1	0.6	17 ± 2.8	0.7
Hindgut	23 ± 8.6	1.3	17 ± 1.4	0.8
Tubules (Free)	22 ± 0.6	1.2	20 ± 0.7	0.9
Perirectal Tubules	31 ± 6.1	1.8
Rectum	18 ± 1.3	1.0
Rectal complex	26 ± 2.4	1.5	24 ± 1.9	1.1
Fat Body	25 ± 4.0	1.4	53 ± 13	2.4
Male Gonads	30 ± 3.2	1.7
Female Gonads	38 ± 2.9	2.2
Carcass	35 ± 6.6	2.0	28 ± 2.5	1.2

Whole Body	17 ± 2.1		23 ± 2.2

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC014005-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC014005	42 ± 4.3	39 ± 6.3	37 ± 6.2	71 ± 14

TC014005-RA	42 ± 4.3	39 ± 6.3	37 ± 6.2	71 ± 14