BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC014085

Symbol
Gr83

Product
Phosphatidate cytidylyltransferase, photoreceptor-specific-like Protein

NCBI Equivalent
656514

Fly Homologues
none identified

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	2.8 ± 0.2	0.9	1.1 ± 0.5	0.4
Brain	1.5 ± 0.1	0.5	2.5 ± 0.3	0.9
Anterior Midgut	38 ± 5.3	12	33 ± 3.2	12
Posterior Midgut	36 ± 2.5	12	33 ± 4.9	12
Hindgut	24 ± 8.8	7.9	12 ± 2.1	4.3
Tubules (Free)	6.8 ± 0.6	2.2	4.0 ± 1.1	1.4
Perirectal Tubules	34 ± 8.7	11
Rectum	16 ± 0.8	5.2
Rectal complex	12 ± 0.9	3.9	8.4 ± 0.7	3.0
Fat Body	1.2 ± 1.3	0.4	0.7 ± 0.2	0.2
Male Gonads	1.0 ± 0.8	0.3
Female Gonads	1.4 ± 0.2	0.5
Carcass	2.6 ± 1.1	0.9	1.6 ± 0.9	0.6

Whole Body	3.1 ± 0.3		2.8 ± 0.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC014085-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC014085	0.8 ± 0.1	0.3 ± 0.1	0.2 ± 0.1	0.1 ± 0.1

TC014085-RA	0.8 ± 0.1	0.3 ± 0.1	0.2 ± 0.1	0.1 ± 0.1