BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC014110

Symbol
LOC658938

Product
Ras-related protein Rab6-like Protein

NCBI Equivalent
658938

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	51 ± 5.8	1.8	39 ± 9.6	1.1
Brain	238 ± 22	8.5	209 ± 25	5.8
Anterior Midgut	34 ± 0.6	1.2	55 ± 5.4	1.6
Posterior Midgut	39 ± 3.4	1.4	50 ± 3.3	1.4
Hindgut	224 ± 74	8.0	150 ± 38	4.2
Tubules (Free)	59 ± 3.2	2.1	51 ± 3.2	1.4
Perirectal Tubules	138 ± 26	5.0
Rectum	93 ± 1.3	3.3
Rectal complex	95 ± 4.7	3.4	72 ± 8.9	2.0
Fat Body	51 ± 0.9	1.8	138 ± 32	3.9
Male Gonads	75 ± 9.3	2.7
Female Gonads	40 ± 3.5	1.4
Carcass	123 ± 17	4.4	89 ± 25	2.5

Whole Body	28 ± 3.9		36 ± 5.2

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC014110-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC014110	67 ± 1.7	52 ± 1.8	68 ± 1.8	118 ± 20

TC014110-RA	67 ± 1.7	52 ± 1.8	68 ± 1.8	118 ± 20