BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC014236
Symbol
 HDAC6
Product
 Histone deacetylase 6-like Protein
NCBI Equivalent
103313051
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head6.5 ± 0.91.57.9 ± 4.00.7
Brain6.7 ± 0.41.56.7 ± 0.50.6
Anterior Midgut2.4 ± 0.50.63.6 ± 0.70.3
Posterior Midgut2.5 ± 0.20.66.3 ± 0.80.6
Hindgut5.4 ± 0.61.210 ± 2.50.9
Tubules (Free)36 ± 1.58.237 ± 2.53.4
Perirectal Tubules11 ± 0.92.4  
Rectum12 ± 0.42.8  
Rectal complex9.3 ± 0.42.19.2 ± 1.20.8
Fat Body9.7 ± 3.42.218 ± 9.91.7
Male Gonads2.1 ± 0.30.5  
Female Gonads4.9 ± 0.51.1  
Carcass7.1 ± 3.21.68.3 ± 4.40.8
Whole Body4.4 ± 0.111 ± 1.7
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC014236-RA
TC014236-RB
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0142361.2 ± 0.00.7 ± 0.11.2 ± 0.11.3 ± 0.4
TC014236-RA0.7 ± 0.20.5 ± 0.40.4 ± 0.70.9 ± 0.7
TC014236-RB0.5 ± 0.10.2 ± 0.30.8 ± 0.70.4 ± 0.3
0–1 h1–24 h24–36 h36–72 h0246810FPKM