BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC014250

Symbol
RasGAP1

Product
GTPase-activating protein 1

NCBI Equivalent
655526

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	5.8 ± 0.2	1.2	3.5 ± 0.5	0.8
Brain	3.1 ± 0.0	0.6	4.1 ± 0.3	0.9
Anterior Midgut	2.1 ± 0.2	0.4	2.6 ± 0.4	0.6
Posterior Midgut	1.9 ± 0.3	0.4	3.5 ± 0.3	0.8
Hindgut	2.3 ± 0.3	0.5	3.7 ± 1.0	0.8
Tubules (Free)	4.4 ± 0.3	0.9	4.2 ± 0.3	0.9
Perirectal Tubules	2.9 ± 1.0	0.6
Rectum	5.5 ± 0.5	1.1
Rectal complex	3.0 ± 0.4	0.6	3.3 ± 0.4	0.8
Fat Body	2.5 ± 0.3	0.5	2.5 ± 0.3	0.6
Male Gonads	3.7 ± 0.8	0.8
Female Gonads	2.6 ± 0.2	0.5
Carcass	2.7 ± 0.2	0.6	2.6 ± 0.5	0.6

Whole Body	4.8 ± 0.4		4.4 ± 2.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC014250-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC014250	2.0 ± 0.1	1.4 ± 0.1	2.1 ± 0.1	2.1 ± 0.6

TC014250-RA	2.0 ± 0.1	1.4 ± 0.1	2.1 ± 0.1	2.1 ± 0.6