BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC014327

Symbol
eIF3h

Product
Eukaryotic translation initiation factor 3 subunit H-like Protein

NCBI Equivalent
135266392

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	23 ± 0.5	0.6	104 ± 32	1.8
Brain	17 ± 0.6	0.4	32 ± 3.3	0.5
Anterior Midgut	251 ± 16	5.9	106 ± 12	1.8
Posterior Midgut	270 ± 31	6.4	114 ± 20	2.0
Hindgut	39 ± 1.6	0.9	50 ± 4.2	0.9
Tubules (Free)	65 ± 1.3	1.5	54 ± 3.5	0.9
Perirectal Tubules	52 ± 7.7	1.2
Rectum	43 ± 0.4	1.0
Rectal complex	47 ± 3.0	1.1	53 ± 1.5	0.9
Fat Body	56 ± 12	1.3	67 ± 13	1.2
Male Gonads	121 ± 5.9	2.9
Female Gonads	157 ± 16	3.7
Carcass	53 ± 6.3	1.2	86 ± 10	1.5

Whole Body	42 ± 1.8		58 ± 13

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC014327-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC014327	142 ± 11	175 ± 46	164 ± 43	85 ± 7.5

TC014327-RA	142 ± 11	175 ± 46	164 ± 43	85 ± 7.5