BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC014342
Symbol
 HDAC4
Product
 Histone deacetylase 5-like Protein
NCBI Equivalent
655770
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head4.1 ± 1.11.014 ± 0.91.7
Brain14 ± 0.33.49.8 ± 1.11.3
Anterior Midgut16 ± 2.43.914 ± 3.31.8
Posterior Midgut18 ± 3.34.514 ± 4.81.8
Hindgut6.1 ± 1.51.57.3 ± 3.20.9
Tubules (Free)4.7 ± 0.41.26.7 ± 0.70.9
Perirectal Tubules13 ± 1.53.1  
Rectum13 ± 1.33.1  
Rectal complex12 ± 0.42.97.5 ± 0.51.0
Fat Body4.4 ± 0.91.114 ± 3.81.8
Male Gonads2.9 ± 0.30.7  
Female Gonads4.9 ± 1.01.2  
Carcass13 ± 9.93.310 ± 3.31.3
Whole Body4.0 ± 0.87.8 ± 2.7
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC014342-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0143426.5 ± 1.92.0 ± 1.71.4 ± 1.22.2 ± 1.6
TC014342-RA6.5 ± 1.92.0 ± 1.71.4 ± 1.22.2 ± 1.6
0–1 h1–24 h24–36 h36–72 h0246810FPKM