BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC014536

Symbol
LOC661843

Product
Endoplasmic reticulum metallopeptidase 1-like Protein

NCBI Equivalent
661843

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	9.1 ± 0.6	0.5	4.7 ± 2.6	0.4
Brain	1.6 ± 0.2	0.1	1.8 ± 0.2	0.2
Anterior Midgut	11 ± 2.0	0.6	21 ± 4.2	1.9
Posterior Midgut	13 ± 2.7	0.7	23 ± 2.7	2.0
Hindgut	3.9 ± 0.8	0.2	7.9 ± 2.8	0.7
Tubules (Free)	10 ± 1.2	0.5	15 ± 3.2	1.3
Perirectal Tubules	38 ± 13	2.0
Rectum	13 ± 0.2	0.7
Rectal complex	14 ± 2.8	0.7	13 ± 0.5	1.1
Fat Body	10 ± 3.2	0.5	3.0 ± 1.5	0.3
Male Gonads	17 ± 4.7	0.9
Female Gonads	1.4 ± 0.3	0.1
Carcass	2.8 ± 0.3	0.1	2.8 ± 0.4	0.3

Whole Body	19 ± 2.3		11 ± 6.2

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC014536-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC014536	0.7 ± 0.1	0.3 ± 0.0	0.3 ± 0.1	0.4 ± 0.2

TC014536-RA	0.7 ± 0.1	0.3 ± 0.0	0.3 ± 0.1	0.4 ± 0.2