BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC014541

Symbol
LOC655128

Product
Cysteine and histidine-rich protein 1 homolog-like Protein

NCBI Equivalent
655128

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	24 ± 3.9	1.2	33 ± 2.0	1.1
Brain	87 ± 1.9	4.3	69 ± 6.3	2.4
Anterior Midgut	6.3 ± 0.5	0.3	9.5 ± 1.8	0.3
Posterior Midgut	8.1 ± 2.1	0.4	17 ± 1.8	0.6
Hindgut	26 ± 9.2	1.3	30 ± 2.1	1.0
Tubules (Free)	27 ± 3.5	1.3	30 ± 1.6	1.1
Perirectal Tubules	23 ± 1.9	1.1
Rectum	29 ± 2.0	1.4
Rectal complex	20 ± 0.8	1.0	24 ± 1.9	0.8
Fat Body	55 ± 7.3	2.7	18 ± 7.1	0.6
Male Gonads	67 ± 13	3.3
Female Gonads	26 ± 1.3	1.3
Carcass	26 ± 3.3	1.3	53 ± 9.7	1.8

Whole Body	20 ± 2.3		29 ± 5.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC014541-RA
TC014541-RB
TC014541-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC014541	15 ± 0.3	46 ± 6.1	25 ± 2.6	24 ± 5.9

TC014541-RA	14 ± 0.3	33 ± 5.1	18 ± 0.6	15 ± 4.2
TC014541-RB	0.3 ± 0.1	4.9 ± 0.5	4.6 ± 0.5	7.2 ± 0.9
TC014541-RC	0.0 ± 0.0	8.8 ± 3.2	1.4 ± 1.6	1.8 ± 1.2