BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC014700

Symbol
LOC663402

Product
Membrane metallo-endopeptidase-like 1

NCBI Equivalent
663402

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	23 ± 1.2	5.4	13 ± 2.1	2.5
Brain	3.9 ± 0.4	0.9	5.2 ± 0.5	1.0
Anterior Midgut	0.2 ± 0.1	0.1	0.1 ± 0.0	0.0
Posterior Midgut	0.2 ± 0.1	0.0	0.1 ± 0.1	0.0
Hindgut	5.0 ± 1.7	1.2	4.5 ± 0.6	0.8
Tubules (Free)	0.0 ± 0.0	0.0	0.0 ± 0.0	0.0
Perirectal Tubules	0.9 ± 1.2	0.2
Rectum	4.0 ± 1.3	0.9
Rectal complex	3.4 ± 0.8	0.8	2.3 ± 0.2	0.4
Fat Body	0.5 ± 0.2	0.1	0.1 ± 0.1	0.0
Male Gonads	0.4 ± 0.3	0.1
Female Gonads	0.9 ± 1.0	0.2
Carcass	29 ± 10	6.8	11 ± 3.8	2.0

Whole Body	4.3 ± 0.1		5.4 ± 0.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC014700-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC014700	0.2 ± 0.0	0.6 ± 0.0	0.1 ± 0.1	0.9 ± 0.1

TC014700-RA	0.2 ± 0.0	0.6 ± 0.0	0.1 ± 0.1	0.9 ± 0.1