BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC015163
Symbol
 Patr-1
NCBI Equivalent
100142489
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head10 ± 1.51.212 ± 0.41.2
Brain21 ± 2.12.419 ± 1.41.9
Anterior Midgut20 ± 1.62.319 ± 1.92.0
Posterior Midgut18 ± 2.12.117 ± 0.61.8
Hindgut9.6 ± 1.41.111 ± 0.61.2
Tubules (Free)11 ± 0.81.213 ± 0.21.4
Perirectal Tubules11 ± 0.61.2  
Rectum13 ± 0.51.5  
Rectal complex10 ± 0.31.29.8 ± 1.01.0
Fat Body8.3 ± 1.51.012 ± 4.21.3
Male Gonads5.6 ± 2.30.6  
Female Gonads34 ± 3.83.9  
Carcass11 ± 0.71.38.2 ± 1.30.9
Whole Body8.7 ± 2.09.6 ± 1.3
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC015163-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC01516312 ± 1.27.4 ± 0.65.5 ± 0.64.9 ± 0.3
TC015163-RA12 ± 1.27.4 ± 0.65.5 ± 0.64.9 ± 0.3
0–1 h1–24 h24–36 h36–72 h05101520FPKM