BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC015172

Symbol
BORCS5

Product
Loss of heterozygosity 12 chromosomal region 1 protein homolog-like Protein

NCBI Equivalent
656191

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	5.2 ± 0.1	0.5	6.7 ± 0.8	1.4
Brain	21 ± 0.4	1.9	17 ± 1.6	3.6
Anterior Midgut	6.6 ± 0.8	0.6	6.2 ± 1.1	1.3
Posterior Midgut	6.7 ± 1.1	0.6	5.9 ± 0.8	1.2
Hindgut	8.1 ± 1.4	0.8	8.4 ± 0.9	1.7
Tubules (Free)	3.9 ± 1.0	0.4	4.4 ± 0.6	0.9
Perirectal Tubules	8.2 ± 2.2	0.8
Rectum	7.2 ± 1.0	0.7
Rectal complex	5.5 ± 0.5	0.5	5.2 ± 1.0	1.1
Fat Body	17 ± 7.5	1.6	7.5 ± 3.1	1.6
Male Gonads	32 ± 0.9	3.0
Female Gonads	12 ± 0.4	1.1
Carcass	5.0 ± 2.8	0.5	8.9 ± 1.8	1.8

Whole Body	11 ± 2.2		4.8 ± 2.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC015172-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC015172	40 ± 5.5	25 ± 1.9	42 ± 6.5	30 ± 3.5

TC015172-RA	40 ± 5.5	25 ± 1.9	42 ± 6.5	30 ± 3.5