BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC015188

Symbol
LOC663534

Product
Putative fatty acyl-CoA reductase CG5065-like Protein

NCBI Equivalent
663534

Fly Homologues
none identified

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	1.1 ± 0.1	0.2	23 ± 14	0.7
Brain	0.0 ± 0.0	0.0	1.1 ± 0.1	0.0
Anterior Midgut	0.3 ± 0.1	0.0	1.6 ± 0.3	0.1
Posterior Midgut	0.3 ± 0.2	0.0	5.1 ± 1.1	0.2
Hindgut	1.1 ± 0.4	0.2	1.7 ± 1.1	0.1
Tubules (Free)	0.0 ± 0.0	0.0	0.5 ± 0.1	0.0
Perirectal Tubules	0.3 ± 0.1	0.0
Rectum	0.4 ± 0.1	0.1
Rectal complex	0.4 ± 0.2	0.1	2.6 ± 0.8	0.1
Fat Body	5.5 ± 3.0	0.9	32 ± 30	1.0
Male Gonads	1.4 ± 0.8	0.2
Female Gonads	4.4 ± 2.1	0.7
Carcass	155 ± 102	26	233 ± 177	7.6

Whole Body	5.9 ± 1.4		31 ± 4.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC015188-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC015188	0.5 ± 0.1	6.5 ± 0.5	3.2 ± 0.3	5.9 ± 0.7

TC015188-RA	0.5 ± 0.1	6.5 ± 0.5	3.2 ± 0.3	5.9 ± 0.7