BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC015203

Symbol
LOC662610

Product
Putative fatty acyl-CoA reductase CG5065-like Protein

NCBI Equivalent
662610

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	26 ± 3.2	2.7	40 ± 34	5.0
Brain	0.1 ± 0.0	0.0	0.6 ± 0.3	0.1
Anterior Midgut	0.3 ± 0.1	0.0	0.1 ± 0.1	0.0
Posterior Midgut	2.9 ± 2.8	0.3	1.4 ± 0.5	0.2
Hindgut	238 ± 106	24	50 ± 37	6.2
Tubules (Free)	1.7 ± 0.2	0.2	4.9 ± 0.9	0.6
Perirectal Tubules	3.4 ± 1.1	0.3
Rectum	2.2 ± 0.7	0.2
Rectal complex	5.3 ± 0.7	0.5	12 ± 8.2	1.5
Fat Body	0.2 ± 0.1	0.0	0.2 ± 0.1	0.0
Male Gonads	13 ± 9.9	1.3
Female Gonads	16 ± 0.9	1.6
Carcass	26 ± 10	2.7	0.4 ± 0.6	0.1

Whole Body	9.8 ± 0.4		8.0 ± 2.7

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC015203-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC015203	0.7 ± 0.1	0.3 ± 0.1	0.0 ± 0.0	0.8 ± 0.1

TC015203-RA	0.7 ± 0.1	0.3 ± 0.1	0.0 ± 0.0	0.8 ± 0.1