BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC015301

Symbol
LOC661549

Product
Cysteine string protein-like Protein

NCBI Equivalent
661549

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	38 ± 2.7	1.5	44 ± 2.8	1.3
Brain	268 ± 2.3	11	182 ± 8.9	5.5
Anterior Midgut	136 ± 7.9	5.5	94 ± 6.4	2.8
Posterior Midgut	150 ± 8.7	6.1	110 ± 15	3.3
Hindgut	106 ± 35	4.3	79 ± 36	2.4
Tubules (Free)	46 ± 5.1	1.9	51 ± 2.2	1.5
Perirectal Tubules	51 ± 9.7	2.0
Rectum	41 ± 2.0	1.6
Rectal complex	39 ± 0.8	1.6	40 ± 2.0	1.2
Fat Body	46 ± 2.1	1.9	80 ± 19	2.4
Male Gonads	91 ± 16	3.7
Female Gonads	79 ± 1.8	3.2
Carcass	85 ± 9.7	3.4	119 ± 26	3.6

Whole Body	25 ± 1.4		33 ± 1.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC015301-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC015301	54 ± 5.4	54 ± 7.2	57 ± 5.5	49 ± 13

TC015301-RA	54 ± 5.4	54 ± 7.2	57 ± 5.5	49 ± 13