BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC015315

Symbol
LOC100142538

NCBI Equivalent
100142538

Fly Homologues
none identified

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	33 ± 5.2	1.8	15 ± 1.0	0.9
Brain	17 ± 0.7	0.9	14 ± 2.5	0.8
Anterior Midgut	30 ± 5.8	1.6	5.8 ± 0.1	0.3
Posterior Midgut	19 ± 1.4	1.0	8.9 ± 1.0	0.5
Hindgut	9.8 ± 0.8	0.5	7.1 ± 0.1	0.4
Tubules (Free)	20 ± 0.2	1.1	27 ± 3.6	1.6
Perirectal Tubules	35 ± 8.0	1.9
Rectum	16 ± 1.3	0.9
Rectal complex	23 ± 1.9	1.2	16 ± 2.6	1.0
Fat Body	18 ± 6.5	1.0	35 ± 18	2.0
Male Gonads	3.4 ± 0.1	0.2
Female Gonads	1.1 ± 0.2	0.1
Carcass	22 ± 9.5	1.2	24 ± 9.3	1.4

Whole Body	18 ± 4.0		17 ± 1.1

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC015315-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC015315	4.5 ± 0.2	8.0 ± 0.2	5.7 ± 0.5	15 ± 0.9

TC015315-RA	4.5 ± 0.2	8.0 ± 0.2	5.7 ± 0.5	15 ± 0.9