BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC015327
Symbol
 LOC660602
Product
 optomotor blind related gene 1 protein
NCBI Equivalent
660602
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head1.1 ± 0.4n.a.8.7 ± 2.64.4
Brain0.0 ± 0.0n.a.0.0 ± 0.1n.a.
Anterior Midgut0.7 ± 0.2n.a.1.8 ± 0.8n.a.
Posterior Midgut2.0 ± 0.81.03.9 ± 1.61.9
Hindgut0.8 ± 0.2n.a.1.9 ± 0.4n.a.
Tubules (Free)7.4 ± 0.73.73.4 ± 0.61.7
Perirectal Tubules62 ± 2131  
Rectum5.5 ± 1.02.8  
Rectal complex29 ± 1.21520 ± 1.99.9
Fat Body0.1 ± 0.1n.a.0.2 ± 0.2n.a.
Male Gonads0.1 ± 0.1n.a.  
Female Gonads0.7 ± 0.3n.a.  
Carcass0.5 ± 0.4n.a.0.9 ± 1.0n.a.
Whole Body0.6 ± 0.11.1 ± 0.3
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC015327-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0153272.5 ± 0.22.0 ± 0.210 ± 1.115 ± 1.0
TC015327-RA2.5 ± 0.22.0 ± 0.210 ± 1.115 ± 1.0
0–1 h1–24 h24–36 h36–72 h05101520FPKM