BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC015328

Symbol
Ubc10

Product
Ubiquitin-conjugating enzyme E2-18 kDa-like Protein

NCBI Equivalent
660484

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	29 ± 1.1	0.6	86 ± 16	1.5
Brain	71 ± 0.1	1.4	95 ± 16	1.6
Anterior Midgut	319 ± 14	6.4	213 ± 37	3.7
Posterior Midgut	315 ± 20	6.3	152 ± 8.0	2.6
Hindgut	93 ± 5.9	1.8	98 ± 36	1.7
Tubules (Free)	47 ± 4.0	0.9	52 ± 1.2	0.9
Perirectal Tubules	51 ± 2.6	1.0
Rectum	44 ± 4.3	0.9
Rectal complex	50 ± 3.4	1.0	51 ± 3.1	0.9
Fat Body	185 ± 56	3.7	139 ± 11	2.4
Male Gonads	306 ± 32	6.1
Female Gonads	156 ± 9.3	3.1
Carcass	148 ± 12	3.0	198 ± 18	3.4

Whole Body	50 ± 7.3		58 ± 26

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC015328-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC015328	384 ± 45	456 ± 102	524 ± 178	380 ± 55

TC015328-RA	384 ± 45	456 ± 102	524 ± 178	380 ± 55