BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC015333

Symbol
Abcd1

Product
ATP-binding cassette sub-family D member 2-like Protein

NCBI Equivalent
659858

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	69 ± 4.0	2.0	54 ± 14	0.8
Brain	49 ± 7.6	1.4	55 ± 6.0	0.8
Anterior Midgut	33 ± 3.6	1.0	38 ± 4.7	0.6
Posterior Midgut	30 ± 2.5	0.9	39 ± 7.6	0.6
Hindgut	39 ± 16	1.1	42 ± 3.3	0.6
Tubules (Free)	25 ± 1.6	0.7	23 ± 1.3	0.3
Perirectal Tubules	38 ± 3.3	1.1
Rectum	33 ± 1.8	1.0
Rectal complex	31 ± 1.1	0.9	36 ± 2.1	0.5
Fat Body	64 ± 47	1.8	914 ± 446	13
Male Gonads	10 ± 1.5	0.3
Female Gonads	25 ± 3.7	0.7
Carcass	178 ± 63	5.1	111 ± 38	1.6

Whole Body	35 ± 1.9		69 ± 3.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC015333-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC015333	5.4 ± 0.7	5.7 ± 0.4	8.1 ± 0.9	6.4 ± 2.3

TC015333-RA	5.4 ± 0.7	5.7 ± 0.4	8.1 ± 0.9	6.4 ± 2.3