BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC015600
NCBI Equivalent
 not available
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head1.0 ± 0.2n.a.0.3 ± 0.2n.a.
Brain1.6 ± 0.3n.a.1.4 ± 0.1n.a.
Anterior Midgut0.3 ± 0.1n.a.0.5 ± 0.3n.a.
Posterior Midgut0.3 ± 0.0n.a.0.7 ± 0.1n.a.
Hindgut1.0 ± 0.3n.a.1.1 ± 0.1n.a.
Tubules (Free)1.0 ± 0.2n.a.0.6 ± 0.1n.a.
Perirectal Tubules0.7 ± 0.3n.a.  
Rectum0.7 ± 0.2n.a.  
Rectal complex0.7 ± 0.3n.a.0.6 ± 0.3n.a.
Fat Body1.6 ± 0.3n.a.1.0 ± 0.8n.a.
Male Gonads1.6 ± 0.1n.a.  
Female Gonads9.7 ± 0.44.8  
Carcass0.5 ± 0.2n.a.0.7 ± 0.4n.a.
Whole Body1.5 ± 0.80.5 ± 0.4
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC015600-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC01560014 ± 0.95.3 ± 0.52.3 ± 0.41.4 ± 0.0
TC015600-RA14 ± 0.95.3 ± 0.52.3 ± 0.41.4 ± 0.0
0–1 h1–24 h24–36 h36–72 h05101520FPKM