BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC015727

Symbol
LOC661644

Product
Protein suppressor of forked-like Protein

NCBI Equivalent
661644

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.5 ± 0.1	0.4	6.0 ± 0.6	1.6
Brain	10 ± 0.3	1.1	9.5 ± 1.0	2.5
Anterior Midgut	12 ± 1.2	1.3	9.2 ± 0.6	2.4
Posterior Midgut	12 ± 1.5	1.3	9.0 ± 1.3	2.3
Hindgut	4.5 ± 0.6	0.5	4.2 ± 0.1	1.1
Tubules (Free)	3.9 ± 0.4	0.4	4.1 ± 0.3	1.0
Perirectal Tubules	4.2 ± 0.2	0.5
Rectum	3.8 ± 0.2	0.4
Rectal complex	4.1 ± 0.7	0.4	3.9 ± 0.4	1.0
Fat Body	15 ± 3.7	1.7	4.3 ± 0.7	1.1
Male Gonads	29 ± 10.0	3.1
Female Gonads	5.0 ± 0.3	0.5
Carcass	4.8 ± 0.6	0.5	4.7 ± 1.6	1.2

Whole Body	9.2 ± 1.2		3.9 ± 0.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC015727-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC015727	4.4 ± 0.5	13 ± 1.9	18 ± 1.6	15 ± 0.9

TC015727-RA	4.4 ± 0.5	13 ± 1.9	18 ± 1.6	15 ± 0.9