BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC015882

Symbol
LOC655406

Product
Sodium- and chloride-dependent GABA transporter ine-like Protein

NCBI Equivalent
655406

Fly Homologues
none identified

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	18 ± 1.2	6.1	8.3 ± 4.7	0.7
Brain	6.9 ± 0.1	2.4	17 ± 6.2	1.4
Anterior Midgut	0.0 ± 0.0	0.0	0.1 ± 0.0	0.0
Posterior Midgut	0.0 ± 0.0	0.0	0.0 ± 0.0	0.0
Hindgut	1.8 ± 2.5	0.6	1.8 ± 0.8	0.2
Tubules (Free)	0.0 ± 0.0	0.0	0.0 ± 0.0	0.0
Perirectal Tubules	0.1 ± 0.1	0.0
Rectum	0.8 ± 0.4	0.3
Rectal complex	0.5 ± 0.1	0.2	1.0 ± 0.2	0.1
Fat Body	0.4 ± 0.2	0.1	0.2 ± 0.1	0.0
Male Gonads	4.5 ± 1.0	1.6
Female Gonads	0.1 ± 0.0	0.0
Carcass	2.3 ± 1.1	0.8	60 ± 57	5.1

Whole Body	2.9 ± 0.5		12 ± 1.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC015882-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC015882	0.1 ± 0.0	0.1 ± 0.0	0.0 ± 0.0	0.1 ± 0.1

TC015882-RA	0.1 ± 0.0	0.1 ± 0.0	0.0 ± 0.0	0.1 ± 0.1