BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC015912

Symbol
LOC656985

Product
Ornithine decarboxylase 1-like Protein

NCBI Equivalent
656985

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	86 ± 6.8	1.7	94 ± 14	0.9
Brain	295 ± 8.9	5.9	327 ± 7.6	3.3
Anterior Midgut	172 ± 15	3.5	177 ± 32	1.8
Posterior Midgut	151 ± 13	3.0	165 ± 30	1.6
Hindgut	111 ± 43	2.2	119 ± 25	1.2
Tubules (Free)	111 ± 1.5	2.2	117 ± 4.9	1.2
Perirectal Tubules	176 ± 21	3.5
Rectum	112 ± 15	2.3
Rectal complex	164 ± 5.7	3.3	173 ± 20	1.7
Fat Body	54 ± 6.0	1.1	171 ± 71	1.7
Male Gonads	45 ± 5.0	0.9
Female Gonads	56 ± 3.0	1.1
Carcass	157 ± 25	3.2	157 ± 11	1.6

Whole Body	50 ± 2.4		100 ± 17

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC015912-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC015912	19 ± 1.7	25 ± 2.5	22 ± 1.0	25 ± 6.1

TC015912-RA	19 ± 1.7	25 ± 2.5	22 ± 1.0	25 ± 6.1