BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC015947

Symbol
Slc35f5

Product
Solute carrier family 35 member F5-like Protein

NCBI Equivalent
658468

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	11 ± 0.9	1.5	10 ± 1.4	1.0
Brain	9.7 ± 0.3	1.4	9.6 ± 0.6	1.0
Anterior Midgut	8.7 ± 0.6	1.3	8.7 ± 1.6	0.9
Posterior Midgut	9.2 ± 0.2	1.3	9.0 ± 0.6	0.9
Hindgut	7.5 ± 0.7	1.1	11 ± 0.3	1.1
Tubules (Free)	11 ± 1.5	1.6	13 ± 0.2	1.3
Perirectal Tubules	7.2 ± 0.8	1.0
Rectum	10 ± 0.4	1.5
Rectal complex	6.6 ± 1.0	1.0	8.7 ± 0.6	0.9
Fat Body	16 ± 0.9	2.3	11 ± 0.9	1.1
Male Gonads	5.3 ± 0.7	0.8
Female Gonads	8.8 ± 0.5	1.3
Carcass	6.8 ± 1.0	1.0	7.7 ± 0.8	0.8

Whole Body	6.9 ± 0.3		10.0 ± 1.7

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC015947-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC015947	13 ± 1.9	9.0 ± 0.9	5.9 ± 0.5	7.0 ± 1.0

TC015947-RA	13 ± 1.9	9.0 ± 0.9	5.9 ± 0.5	7.0 ± 1.0