BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC016111

Symbol
LOC656137

Product
DNA replication complex GINS protein PSF1-like Protein

NCBI Equivalent
656137

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	7.7 ± 0.8	0.5	4.8 ± 1.8	1.4
Brain	3.5 ± 0.7	0.2	6.3 ± 1.4	1.9
Anterior Midgut	3.1 ± 1.0	0.2	3.5 ± 0.9	1.0
Posterior Midgut	4.0 ± 0.9	0.3	3.8 ± 0.9	1.1
Hindgut	5.7 ± 1.4	0.4	4.1 ± 0.7	1.2
Tubules (Free)	6.8 ± 1.0	0.5	4.7 ± 0.2	1.4
Perirectal Tubules	8.5 ± 1.8	0.6
Rectum	6.8 ± 0.7	0.5
Rectal complex	7.5 ± 0.8	0.5	4.0 ± 0.7	1.2
Fat Body	15 ± 2.2	1.0	6.7 ± 3.9	2.0
Male Gonads	30 ± 3.7	2.1
Female Gonads	12 ± 1.9	0.9
Carcass	6.9 ± 1.8	0.5	4.9 ± 1.1	1.4

Whole Body	14 ± 1.0		3.4 ± 1.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC016111-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC016111	76 ± 7.9	52 ± 2.3	53 ± 4.4	21 ± 5.3

TC016111-RA	76 ± 7.9	52 ± 2.3	53 ± 4.4	21 ± 5.3