BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC016126

Symbol
Sfxn2

Product
Sideroflexin-2-like Protein

NCBI Equivalent
656308

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	60 ± 3.0	1.5	40 ± 6.0	2.0
Brain	33 ± 2.8	0.9	27 ± 0.6	1.4
Anterior Midgut	19 ± 4.5	0.5	9.2 ± 1.9	0.5
Posterior Midgut	14 ± 0.9	0.4	8.1 ± 0.4	0.4
Hindgut	26 ± 4.7	0.7	13 ± 0.4	0.6
Tubules (Free)	29 ± 1.3	0.7	20 ± 1.2	1.0
Perirectal Tubules	37 ± 9.2	1.0
Rectum	26 ± 2.0	0.7
Rectal complex	23 ± 1.7	0.6	20 ± 3.4	1.0
Fat Body	61 ± 48	1.6	67 ± 16	3.3
Male Gonads	8.5 ± 0.7	0.2
Female Gonads	18 ± 2.6	0.5
Carcass	301 ± 272	7.7	89 ± 15	4.4

Whole Body	39 ± 2.6		20 ± 4.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC016126-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC016126	23 ± 1.1	12 ± 0.9	9.6 ± 0.3	11 ± 1.2

TC016126-RA	23 ± 1.1	12 ± 0.9	9.6 ± 0.3	11 ± 1.2