BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC016226

Symbol
LOC656792

NCBI Equivalent
656792

Fly Homologues
none identified

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	5.8 ± 0.1	0.4	5.1 ± 1.5	1.3
Brain	10 ± 0.5	0.7	10.0 ± 0.9	2.5
Anterior Midgut	3.5 ± 0.3	0.2	5.3 ± 0.9	1.3
Posterior Midgut	3.9 ± 0.2	0.3	6.1 ± 0.6	1.5
Hindgut	5.1 ± 1.0	0.4	4.9 ± 0.9	1.2
Tubules (Free)	3.9 ± 0.5	0.3	4.2 ± 0.6	1.1
Perirectal Tubules	3.3 ± 0.2	0.2
Rectum	5.1 ± 0.2	0.4
Rectal complex	3.8 ± 0.1	0.3	3.8 ± 0.3	0.9
Fat Body	20 ± 5.9	1.4	3.4 ± 0.3	0.9
Male Gonads	36 ± 2.6	2.5
Female Gonads	36 ± 6.5	2.5
Carcass	6.5 ± 1.5	0.4	7.8 ± 0.8	1.9

Whole Body	14 ± 1.3		4.0 ± 0.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC016226-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC016226	55 ± 1.4	21 ± 3.3	25 ± 2.9	21 ± 3.1

TC016226-RA	55 ± 1.4	21 ± 3.3	25 ± 2.9	21 ± 3.1