BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC016351

Symbol
LOC656806

Product
Protein NPC2 homolog-like Protein

NCBI Equivalent
656806

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	112 ± 4.9	3.2	130 ± 70	0.8
Brain	4.8 ± 1.7	0.1	9.8 ± 3.1	0.1
Anterior Midgut	9.5 ± 1.4	0.3	6.5 ± 1.8	0.0
Posterior Midgut	15 ± 8.0	0.4	5.9 ± 2.1	0.0
Hindgut	2538 ± 2147	72	403 ± 347	2.5
Tubules (Free)	5.0 ± 0.6	0.1	1.0 ± 0.6	0.0
Perirectal Tubules	57 ± 30	1.6
Rectum	123 ± 16	3.5
Rectal complex	101 ± 8.4	2.9	99 ± 32	0.6
Fat Body	88 ± 46	2.5	20 ± 17	0.1
Male Gonads	4.7 ± 1.4	0.1
Female Gonads	99 ± 45	2.8
Carcass	1092 ± 429	31	7365 ± 3717	45

Whole Body	35 ± 1.6		163 ± 121

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC016351-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC016351	52 ± 2.8	165 ± 14	641 ± 200	134 ± 25

TC016351-RA	52 ± 2.8	165 ± 14	641 ± 200	134 ± 25