BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC016369

Symbol
Sf3b5

Product
Probable splicing factor 3B subunit 5-like Protein

iBeetle-Base
TC016369

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
No paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	17 ± 2.6	1.0	42 ± 14	1.3
Brain	27 ± 1.2	1.6	39 ± 5.1	1.2
Anterior Midgut	139 ± 5.3	8.1	91 ± 21	2.8
Posterior Midgut	159 ± 11	9.2	67 ± 5.7	2.1
Hindgut	47 ± 5.5	2.7	30 ± 14	0.9
Tubule	28 ± 1.5	1.6	27 ± 1.7	0.8
Perirectal Tubules	48 ± 14	2.8
Rectal complex	56 ± 5.9	3.3	41 ± 2.6	1.3
Rectum	15 ± 1.3	0.9
Fat Body	38 ± 9.2	2.2	64 ± 30	2.0
Male Gonads	31 ± 7.5	1.8
Female Gonads	50 ± 2.4	2.9
Carcass	41 ± 15	2.4	50 ± 6.7	1.6

Whole Body	17 ± 1.5		32 ± 9.0

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC016369-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC016369	218 ± 39	563 ± 58	628 ± 157	320 ± 67

TC016369-RA	218 ± 39	563 ± 58	628 ± 157	320 ± 67