BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC016380

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	24 ± 1.2	0.7	17 ± 5.4	0.9
Brain	1.6 ± 0.5	0.0	2.2 ± 0.3	0.1
Anterior Midgut	3.3 ± 0.1	0.1	13 ± 0.4	0.7
Posterior Midgut	3.8 ± 0.4	0.1	10 ± 2.4	0.6
Hindgut	3.8 ± 0.9	0.1	5.7 ± 2.7	0.3
Tubules (Free)	22 ± 2.4	0.6	57 ± 3.6	3.1
Perirectal Tubules	27 ± 6.7	0.8
Rectum	11 ± 0.4	0.3
Rectal complex	25 ± 3.9	0.7	16 ± 2.8	0.9
Fat Body	23 ± 7.4	0.7	6.7 ± 0.5	0.4
Male Gonads	79 ± 35	2.3
Female Gonads	3.4 ± 1.8	0.1
Carcass	16 ± 7.6	0.5	4.7 ± 1.4	0.3

Whole Body	35 ± 6.3		18 ± 8.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC016380-RA
TC016380-RB
TC016380-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC016380	5.9 ± 0.6	9.3 ± 0.5	5.4 ± 0.1	4.3 ± 0.9

TC016380-RA	0.7 ± 0.1	0.9 ± 0.2	0.8 ± 0.2	0.5 ± 0.1
TC016380-RB	5.2 ± 0.7	8.4 ± 0.7	4.6 ± 0.2	3.7 ± 0.8
TC016380-RC	0.0 ± 0.0	0.0 ± 0.0	0.1 ± 0.0	0.1 ± 0.0