BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC016401

Symbol
LOC103314794

NCBI Equivalent
103314794

Fly Homologues
none identified

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	17 ± 1.2	1.3	11 ± 0.4	0.9
Brain	52 ± 5.9	4.0	38 ± 1.8	3.2
Anterior Midgut	11 ± 2.2	0.9	14 ± 2.6	1.2
Posterior Midgut	9.6 ± 1.3	0.7	16 ± 0.6	1.4
Hindgut	35 ± 2.7	2.6	31 ± 6.5	2.6
Tubules (Free)	18 ± 2.0	1.3	18 ± 1.2	1.5
Perirectal Tubules	29 ± 9.4	2.2
Rectum	24 ± 2.2	1.8
Rectal complex	11 ± 0.6	0.9	9.6 ± 0.4	0.8
Fat Body	41 ± 9.2	3.1	49 ± 6.7	4.1
Male Gonads	53 ± 8.0	4.0
Female Gonads	8.7 ± 1.4	0.7
Carcass	33 ± 1.9	2.5	52 ± 10	4.4

Whole Body	13 ± 4.2		12 ± 1.7

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC016401-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC016401	6.2 ± 0.2	35 ± 3.7	57 ± 2.1	53 ± 14

TC016401-RA	6.2 ± 0.2	35 ± 3.7	57 ± 2.1	53 ± 14