BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC030601

Symbol
Polr3F

Product
Probable DNA-directed RNA polymerase III subunit RPC6-like Protein

NCBI Equivalent
660143

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	4.5 ± 0.7	0.4	9.8 ± 1.2	1.4
Brain	3.5 ± 0.6	0.3	4.2 ± 0.2	0.6
Anterior Midgut	9.6 ± 0.7	0.7	6.7 ± 1.3	1.0
Posterior Midgut	8.9 ± 0.7	0.7	7.1 ± 1.2	1.0
Hindgut	4.4 ± 1.0	0.3	3.8 ± 0.2	0.6
Tubules (Free)	8.1 ± 0.3	0.6	8.0 ± 0.8	1.2
Perirectal Tubules	5.8 ± 0.6	0.5
Rectum	4.5 ± 0.1	0.4
Rectal complex	8.0 ± 0.9	0.6	7.1 ± 1.5	1.0
Fat Body	11 ± 1.2	0.9	5.7 ± 0.5	0.8
Male Gonads	23 ± 2.3	1.8
Female Gonads	8.7 ± 0.6	0.7
Carcass	4.2 ± 1.3	0.3	6.9 ± 1.4	1.0

Whole Body	13 ± 2.4		6.9 ± 0.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC030601-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC030601	52 ± 6.8	35 ± 2.1	34 ± 4.4	23 ± 1.9

TC030601-RA	52 ± 6.8	35 ± 2.1	34 ± 4.4	23 ± 1.9