BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC030686

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	7.5 ± 0.7	1.7	11 ± 1.6	1.2
Brain	14 ± 0.8	3.1	10 ± 0.8	1.2
Anterior Midgut	20 ± 4.0	4.5	18 ± 1.6	2.1
Posterior Midgut	21 ± 4.9	4.7	17 ± 1.8	2.0
Hindgut	9.8 ± 2.6	2.2	12 ± 0.7	1.4
Tubules (Free)	14 ± 0.2	3.1	17 ± 0.6	2.0
Perirectal Tubules	12 ± 1.1	2.7
Rectum	9.3 ± 0.0	2.1
Rectal complex	10 ± 0.9	2.3	9.1 ± 1.0	1.0
Fat Body	8.5 ± 4.4	1.9	11 ± 4.8	1.2
Male Gonads	3.4 ± 0.8	0.8
Female Gonads	8.4 ± 1.7	1.9
Carcass	16 ± 5.5	3.6	10 ± 3.2	1.2

Whole Body	4.5 ± 0.3		8.8 ± 1.7

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC030686-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC030686	1.6 ± 0.1	1.6 ± 0.1	1.3 ± 0.1	1.9 ± 0.9

TC030686-RA	1.6 ± 0.1	1.6 ± 0.1	1.3 ± 0.1	1.9 ± 0.9