BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC030695

Symbol
LSm7

Product
Probable small nuclear ribonucleoprotein G-like Protein

NCBI Equivalent
658224

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	7.1 ± 2.6	0.6	19 ± 3.3	1.2
Brain	2.6 ± 0.1	0.2	6.8 ± 1.2	0.4
Anterior Midgut	23 ± 3.7	1.9	14 ± 4.5	0.9
Posterior Midgut	28 ± 5.0	2.3	12 ± 4.3	0.7
Hindgut	6.9 ± 3.4	0.6	5.6 ± 1.1	0.3
Tubules (Free)	11 ± 0.4	0.9	12 ± 0.6	0.8
Perirectal Tubules	15 ± 3.6	1.2
Rectum	13 ± 0.6	1.1
Rectal complex	11 ± 2.0	0.9	17 ± 0.7	1.0
Fat Body	7.9 ± 3.5	0.7	14 ± 5.0	0.8
Male Gonads	9.0 ± 1.7	0.7
Female Gonads	24 ± 3.0	2.0
Carcass	5.9 ± 3.0	0.5	10 ± 1.8	0.6

Whole Body	12 ± 1.9		16 ± 5.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC030695-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC030695	254 ± 37	231 ± 20	370 ± 92	129 ± 16

TC030695-RA	254 ± 37	231 ± 20	370 ± 92	129 ± 16