BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC030737

Symbol
Cdc16

Product
Cell division cycle protein 16 homolog-like Protein

NCBI Equivalent
658265

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.6 ± 0.6	0.4	9.0 ± 0.5	1.9
Brain	2.5 ± 0.2	0.3	3.3 ± 0.2	0.7
Anterior Midgut	8.8 ± 0.3	0.9	4.0 ± 0.4	0.9
Posterior Midgut	7.4 ± 0.5	0.8	4.9 ± 0.9	1.0
Hindgut	3.3 ± 0.6	0.3	4.5 ± 1.3	1.0
Tubules (Free)	6.2 ± 0.4	0.6	4.7 ± 0.5	1.0
Perirectal Tubules	6.7 ± 0.4	0.7
Rectum	7.4 ± 0.2	0.8
Rectal complex	7.6 ± 0.6	0.8	7.6 ± 1.0	1.6
Fat Body	5.6 ± 0.7	0.6	3.5 ± 0.6	0.7
Male Gonads	12 ± 1.6	1.3
Female Gonads	4.9 ± 0.5	0.5
Carcass	3.3 ± 0.2	0.3	3.3 ± 0.8	0.7

Whole Body	9.5 ± 0.4		4.7 ± 0.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC030737-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC030737	3.9 ± 0.3	4.9 ± 0.1	7.1 ± 0.5	3.9 ± 0.4

TC030737-RA	3.9 ± 0.3	4.9 ± 0.1	7.1 ± 0.5	3.9 ± 0.4