BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC030743
Symbol
 Tif-IA
Product
 RNA polymerase I-specific transcription initiation factor RRN3-like Protein
NCBI Equivalent
661521
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head5.6 ± 0.40.811 ± 2.31.8
Brain5.7 ± 0.50.85.9 ± 0.10.9
Anterior Midgut7.6 ± 1.21.04.7 ± 0.90.7
Posterior Midgut6.6 ± 0.60.96.5 ± 0.31.0
Hindgut2.7 ± 0.60.44.0 ± 0.20.6
Tubules (Free)9.0 ± 1.41.26.9 ± 0.21.1
Perirectal Tubules5.2 ± 0.10.7  
Rectum5.8 ± 0.40.8  
Rectal complex5.7 ± 0.30.87.1 ± 0.51.1
Fat Body5.2 ± 0.70.75.5 ± 1.50.9
Male Gonads6.8 ± 0.90.9  
Female Gonads17 ± 3.12.3  
Carcass5.8 ± 1.80.84.8 ± 1.40.7
Whole Body7.2 ± 1.26.4 ± 0.5
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC030743-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC03074313 ± 1.09.5 ± 1.64.2 ± 0.43.6 ± 0.3
TC030743-RA13 ± 1.09.5 ± 1.64.2 ± 0.43.6 ± 0.3
0–1 h1–24 h24–36 h36–72 h05101520FPKM